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    LOC4344228 BTB/POZ domain-containing protein At3g05675 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344228, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4344228
    Gene description
    BTB/POZ domain-containing protein At3g05675
    Locus tag
    OSNPB_070668800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344228 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (28475168..28477471)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (28247333..28249709)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 37-like Neighboring gene lipase Neighboring gene probable serine/threonine-protein kinase PBL7 Neighboring gene DNA polymerase zeta catalytic subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein At3g05675
    Names
    Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence H-BTB7
    Os07g0668800
    P0625E02.114

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      28475168..28477471
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789638.3 → XP_015645124.1  BTB/POZ domain-containing protein At3g05675

      UniProtKB/TrEMBL
      A0A0N7KP12, A2YPR4, B9FUS3, Q8H3R1
      Conserved Domains (1) summary
      cd18186
      Location:19 → 112
      BTB_POZ_ZBTB_KLHL-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL) proteins, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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