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    LOC4341430 uncharacterized LOC4341430 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341430, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4341430
    Gene description
    uncharacterized LOC4341430
    Locus tag
    OSNPB_060595900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4341430 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (24294442..24301036, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (23442824..23449547, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939257 Neighboring gene acyl transferase 7-like Neighboring gene uncharacterized LOC112939378 Neighboring gene uncharacterized LOC136357096 Neighboring gene palmitoyl-acyl carrier protein thioesterase, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4341430
    Names
    Os06g0595900
    death-inducer obliterator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      24294442..24301036 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785624.3 → XP_015641110.1  uncharacterized protein LOC4341430

      UniProtKB/TrEMBL
      A3BD94
      Conserved Domains (2) summary
      pfam07500
      Location:318 → 398
      TFIIS_M; Transcription factor S-II (TFIIS), central domain
      pfam07744
      Location:654 → 760
      SPOC; SPOC domain
    Nucleotide Protein
    Heading Accession and Version

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