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    LOC107278586 uncharacterized LOC107278586 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107278586, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC107278586
    Gene description
    uncharacterized LOC107278586
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC107278586 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (28597523..28599871, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (27723963..27727285, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene protein SOSEKI 3 Neighboring gene hydroxyproline O-galactosyltransferase GALT5-like Neighboring gene uncharacterized LOC9272634 Neighboring gene uncharacterized LOC4333788 Neighboring gene uncharacterized LOC4333789

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC107278586
    Names
    Os03g0692700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      28597523..28599871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015776977.2 → XP_015632463.1  uncharacterized protein LOC107278586

      UniProtKB/TrEMBL
      A0A0P0W1M2, A0A0P0W1R1, B8APX8, Q851I5
      Conserved Domains (1) summary
      pfam04398
      Location:36 → 141
      DUF538; Protein of unknown function, DUF538
    Nucleotide Protein
    Heading Accession and Version

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