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    LOC4336497 salutaridine reductase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336497, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4336497
    Gene description
    salutaridine reductase
    Locus tag
    OSNPB_040532400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336497 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (27120919..27122599)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (26617398..26619095)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene salutaridine reductase Neighboring gene salutaridine reductase Neighboring gene LIM domain-containing protein PLIM2b-like Neighboring gene transcription factor LAF1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    salutaridine reductase
    Names
    Os04g0532400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      27120919..27122599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780116.3 → XP_015635602.1  salutaridine reductase isoform X2

      UniProtKB/TrEMBL
      A0A0N7KJE9, A2XVU4, A3AVV1, Q00RH3, Q7X7F0
      Conserved Domains (1) summary
      cl21454
      Location:14 → 303
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_015780117.3 → XP_015635603.1  salutaridine reductase isoform X3

      UniProtKB/TrEMBL
      A2XVU4, A3AVV1, Q00RH3
      Conserved Domains (2) summary
      pfam00106
      Location:12 → 269
      adh_short; short chain dehydrogenase
      cl21454
      Location:12 → 301
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    3. XM_066309579.1 → XP_066165676.1  salutaridine reductase isoform X1

      UniProtKB/TrEMBL
      A2XVU4, A3AVV1, Q00RH3
    Nucleotide Protein
    Heading Accession and Version

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