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    LOC4336596 O-fucosyltransferase 29 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336596, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4336596
    Gene description
    O-fucosyltransferase 29
    Locus tag
    OSNPB_040551300
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336596 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (28113515..28117595, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (27608448..27612499, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene aquaporin TIP2-3-like Neighboring gene malate dehydrogenase, cytoplasmic-like Neighboring gene squamosa promoter-binding-like protein 7 Neighboring gene uncharacterized LOC4336598

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    O-fucosyltransferase 29
    Names
    Os04g0551300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419738.1 → NP_001406667.1  O-fucosyltransferase 29 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK103502, AP014960, CI609195
      UniProtKB/TrEMBL
      Q7FAT8

    2. NM_001419739.1 → NP_001406668.1  O-fucosyltransferase 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK103502, AP014960, CI609195

    RNA

    1. NR_185095.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK103502, AP014960, CF303514, CI609195

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      28113515..28117595 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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