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    LOC4350081 protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350081, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4350081
    Gene description
    protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic
    Locus tag
    OSNPB_110216300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4350081 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (6125704..6131204, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (6068236..6073794, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase 1, cytosolic Neighboring gene NAD(P)H-quinone oxidoreductase subunit T, chloroplastic Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene DAG protein, chloroplastic Neighboring gene methylthioribose-1-phosphate isomerase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic
    Names
    Os11g0216300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      6125704..6131204 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015762400.3 → XP_015617886.1  protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic

      UniProtKB/TrEMBL
      B8BJP9, Q2R8U3
      Conserved Domains (1) summary
      COG0661
      Location:101 → 564
      AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]

    2. XM_015762399.2 → XP_015617885.1  protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic

      UniProtKB/TrEMBL
      B8BJP9, Q2R8U3
      Conserved Domains (1) summary
      COG0661
      Location:101 → 564
      AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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