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    LOC4332717 NAC domain-containing protein 58-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332717, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4332717
    Gene description
    NAC domain-containing protein 58-like
    Locus tag
    OSNPB_030327800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    NAC58
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    Genomic context

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    See LOC4332717 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (12029011..12031424, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (11973970..11976425, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112938291 Neighboring gene uncharacterized LOC136355757 Neighboring gene guanine nucleotide exchange factor SPIKE 1 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAC domain-containing protein 58-like
    Names
    NAC transcription factor 47
    NAC transcription factor 58
    Os03g0327800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      12029011..12031424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015776915.3 → XP_015632401.1  NAC domain-containing protein 58-like

      UniProtKB/Swiss-Prot
      Q0DS77, Q8H7M1
      UniProtKB/TrEMBL
      A0A0P0VX00, B9F887
      Conserved Domains (1) summary
      pfam02365
      Location:10 → 139
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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