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    LOC4329622 uncharacterized protein At4g26450 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329622, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC4329622
    Gene description
    uncharacterized protein At4g26450
    Locus tag
    OSNPB_020550000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in roots after flowering (RPKM 16.1), leaves after flowering (RPKM 14.6) and 6 other tissues See more
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (21155079..21160872)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (20676296..20682215)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4329620 Neighboring gene uncharacterized LOC107277741 Neighboring gene V-type proton ATPase 16 kDa proteolipid subunit Neighboring gene uncharacterized LOC107279892

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein At4g26450
    Names
    OSJNBa0040I22.24
    Os02g0550000
    P0451A10.12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      21155079..21160872
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015771109.3 → XP_015626595.2  uncharacterized protein At4g26450 isoform X1

      UniProtKB/TrEMBL
      A0A0N7KFG5, Q0E0I3

    2. XM_015771110.3 → XP_015626596.2  uncharacterized protein At4g26450 isoform X2

      UniProtKB/TrEMBL
      A0A0N7KFG5, Q0E0I3
    Nucleotide Protein
    Heading Accession and Version

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