U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4330268 protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330268, updated on 12-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC4330268
    Gene description
    protein ALTERED PHOSPHATE STARVATION RESPONSE 1
    Locus tag
    OSNPB_020669900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1725_H08.36
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC4330268 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27689748..27694123)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (27203053..27207807)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4330266 Neighboring gene ASI1-immunoprecipitated protein 1 Neighboring gene protein LAZ1 Neighboring gene probable serine/threonine-protein kinase PIX13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein ALTERED PHOSPHATE STARVATION RESPONSE 1
    Names
    Os02g0669900
    P0684A08.22
    putative bZIP protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      27689748..27694123
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772020.3 → XP_015627506.1  protein ALTERED PHOSPHATE STARVATION RESPONSE 1

      UniProtKB/TrEMBL
      B8AGE4, B9F1K4
      Conserved Domains (2) summary
      pfam04782
      Location:341 → 637
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 53
      DUF630; Protein of unknown function (DUF630)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials