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    LOC4348971 ripening-related protein 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348971, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4348971
    Gene description
    ripening-related protein 3-like
    Locus tag
    OSNPB_100490100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsJ_31982
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (19286113..19286950)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (18598543..18599397)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4348969 Neighboring gene CDT1-like protein b Neighboring gene uncharacterized LOC112936562 Neighboring gene uncharacterized LOC136353565

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ripening-related protein 3
    Names
    B1288B10.12
    LOC_Os10g34840
    OSJNBa0051D19.24

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423071.1 → NP_001410000.1  ripening-related protein 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AK102387, CI199616
      UniProtKB/Swiss-Prot
      A3C5Z7, Q0IWS8, Q7XD62, Q9FWT5
      UniProtKB/TrEMBL
      A2Z8T4

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      19286113..19286950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FWT5.1 GenPept UniProtKB/Swiss-Prot:Q9FWT5

    Gene LinkOut

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