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    LOC4332461 uncharacterized LOC4332461 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332461, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4332461
    Gene description
    uncharacterized LOC4332461
    Locus tag
    OSNPB_030283800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332461 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (9794381..9801858)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (9743506..9751190)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At2g37310-like Neighboring gene cardiolipin synthase (CMP-forming), mitochondrial-like Neighboring gene serine/threonine-protein kinase PBL27 Neighboring gene elongator complex protein 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4332461
    Names
    Os03g0283800
    TBC1 domain family member 30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      9794381..9801858
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015774883.3 → XP_015630369.1  uncharacterized protein LOC4332461 isoform X1

      UniProtKB/TrEMBL
      B9F7E3, Q8H8T8
      Conserved Domains (1) summary
      pfam00566
      Location:392 → 558
      RabGAP-TBC; Rab-GTPase-TBC domain

    2. XM_015774882.3 → XP_015630368.2  uncharacterized protein LOC4332461 isoform X2

    3. XM_015774884.3 → XP_015630370.1  uncharacterized protein LOC4332461 isoform X3

      UniProtKB/TrEMBL
      B8ALI8
      Conserved Domains (1) summary
      pfam00566
      Location:383 → 549
      RabGAP-TBC; Rab-GTPase-TBC domain
    Nucleotide Protein
    Heading Accession and Version

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