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    LOC4326799 uncharacterized LOC4326799 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326799, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4326799
    Gene description
    uncharacterized LOC4326799
    Locus tag
    OSNPB_010338600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    B1088D01.9
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    Genomic context

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    See LOC4326799 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (13362943..13367399, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (13319342..13323941, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor TFIID subunit 13 Neighboring gene AMSH-like ubiquitin thioesterase 3 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA asparagine (anticodon GUU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4326799
    Names
    Os01g0338600
    cyanobacteria-specific protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      13362943..13367399 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766544.2 → XP_015622030.1  uncharacterized protein LOC4326799 isoform X2

      UniProtKB/TrEMBL
      A0A0P0V2M9, B8A7H0, B9EW86, Q5ZB95

    2. XM_015766545.2 → XP_015622031.1  uncharacterized protein LOC4326799 isoform X4

    3. XM_066312289.1 → XP_066168386.1  uncharacterized protein LOC4326799 isoform X4

    4. XM_066312286.1 → XP_066168383.1  uncharacterized protein LOC4326799 isoform X3

    5. XM_066312287.1 → XP_066168384.1  uncharacterized protein LOC4326799 isoform X3

    6. XM_066312284.1 → XP_066168381.1  uncharacterized protein LOC4326799 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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