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    LOC4346054 L-gulonolactone oxidase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346054, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4346054
    Gene description
    L-gulonolactone oxidase 2
    Locus tag
    OSNPB_080519100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4346054 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (25916068..25917804, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (25769814..25771543, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene xylanase inhibitor protein 1-like Neighboring gene uncharacterized LOC4346053 Neighboring gene retrovirus-related Pol polyprotein from transposon RE2 Neighboring gene xylanase inhibitor protein 1-like Neighboring gene spindle pole body component 110

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-arabinono-1,4-lactone oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    L-gulonolactone oxidase 2
    Names
    Os08g0519100
    P0689E12.10-1
    P0689E12.10-2
    P0700D12.134-1
    P0700D12.134-2
    oxidase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      25916068..25917804 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793106.2 → XP_015648592.1  L-gulonolactone oxidase 2

      UniProtKB/TrEMBL
      A0A0N7KQ55, B8B8T5, Q0J4E3, Q6ZBK9, Q7EZA6, Q7EZA7
      Conserved Domains (1) summary
      TIGR01677
      Location:31 → 498
      pln_FAD_oxido; plant-specific FAD-dependent oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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