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    LOC4347551 hsp70 nucleotide exchange factor FES1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347551, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4347551
    Gene description
    hsp70 nucleotide exchange factor FES1
    Locus tag
    OSNPB_090512700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4347551 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (24354754..24359976)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (19943521..19948746)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4347549 Neighboring gene uncharacterized LOC107277245 Neighboring gene uncharacterized LOC107275390 Neighboring gene DNA repair RAD52-like protein 2, chloroplastic Neighboring gene UPF0664 stress-induced protein C29B12.11c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables adenyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hsp70 nucleotide exchange factor FES1; uncharacterized protein LOC4347551
    Names
    Os09g0512700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      24354754..24359976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756892.3 → XP_015612378.1  hsp70 nucleotide exchange factor FES1 isoform X2

      UniProtKB/TrEMBL
      A0A0P0XQG7, A2Z320, Q0J0F7
      Conserved Domains (2) summary
      sd00043
      Location:181 → 213
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:91 → 182
      Fes1; Nucleotide exchange factor Fes1

    2. XM_066304350.1 → XP_066160447.1  uncharacterized protein LOC4347551 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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