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    LOC4348739 uncharacterized LOC4348739 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348739, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4348739
    Gene description
    uncharacterized LOC4348739
    Locus tag
    OSNPB_100444400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4348739 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (16681071..16685614)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (16016830..16021371)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9268141 Neighboring gene uncharacterized LOC4348738 Neighboring gene uncharacterized LOC107276329 Neighboring gene pentatricopeptide repeat-containing protein At3g24000, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4348739
    Names
    Os10g0444400
    protein GDAP2 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      16681071..16685614
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015758634.3 → XP_015614120.1  uncharacterized protein LOC4348739

      UniProtKB/TrEMBL
      A0A8J8Y6Y3, A2Z7W3, B9G5Y8, Q7XDZ9
      Conserved Domains (2) summary
      cd02905
      Location:114 → 282
      Macro_GDAP2-like; macrodomain, GDAP2-like family
      pfam13716
      Location:439 → 572
      CRAL_TRIO_2; Divergent CRAL/TRIO domain

    RNA

    1. XR_010736907.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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