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    LOC4331805 uncharacterized LOC4331805 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331805, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331805
    Gene description
    uncharacterized LOC4331805
    Locus tag
    OSNPB_030176800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4331805 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (4084639..4088757, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (4073554..4077772, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene AP2-like ethylene-responsive transcription factor AIL5 Neighboring gene uncharacterized LOC9266492 Neighboring gene uncharacterized LOC4331806 Neighboring gene GCN5-related N-acetyltransferase 6, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4331805
    Names
    Os03g0176800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      4084639..4088757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015774241.3 → XP_015629727.1  uncharacterized protein LOC4331805 isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y2S5, B8APR4, B9FBM3, Q0DUN3, Q10R04
      Conserved Domains (2) summary
      cl11943
      Location:385 → 452
      Activator-TraM; Transcriptional activator TraM
      pfam07762
      Location:114 → 257
      DUF1618; Protein of unknown function (DUF1618)

    2. XM_015774242.3 → XP_015629728.1  uncharacterized protein LOC4331805 isoform X2

      UniProtKB/TrEMBL
      Q0DUN3
      Conserved Domains (1) summary
      pfam07762
      Location:114 → 257
      DUF1618; Protein of unknown function (DUF1618)
    Nucleotide Protein
    Heading Accession and Version

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