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    LOC4334421 uncharacterized LOC4334421 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334421, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4334421
    Gene description
    uncharacterized LOC4334421
    Locus tag
    OSNPB_030796400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334421 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (34110704..34113573, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (33138560..33141594, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene stem-specific protein TSJT1 Neighboring gene uncharacterized LOC4334420 Neighboring gene pistil-specific extensin-like protein Neighboring gene large ribosomal subunit protein uL4 Neighboring gene uncharacterized LOC4334422

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4334421
    Names
    Os03g0796400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      34110704..34113573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066309075.1 → XP_066165172.1  uncharacterized protein LOC4334421

      UniProtKB/TrEMBL
      B9F6G1, Q6F393

    2. XM_015773507.3 → XP_015628993.1  uncharacterized protein LOC4334421

      UniProtKB/TrEMBL
      A0A0P0W487, B9F6G1, Q6F393
      Conserved Domains (2) summary
      pfam03735
      Location:244 → 287
      ENT; ENT domain
      cl22958
      Location:49 → 103
      Agenet; Agenet domain

    3. XM_015773506.3 → XP_015628992.1  uncharacterized protein LOC4334421

      UniProtKB/TrEMBL
      A0A0P0W487, B9F6G1, Q6F393
      Conserved Domains (2) summary
      pfam03735
      Location:244 → 287
      ENT; ENT domain
      cl22958
      Location:49 → 103
      Agenet; Agenet domain
    Nucleotide Protein
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