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    LOC4330783 F-box protein FBW2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330783, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC4330783
    Gene description
    F-box protein FBW2
    Locus tag
    OSNPB_020757700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4330783 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (32404030..32406987)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (31908537..31911673)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene protein PHOSPHATE-INDUCED 1 homolog Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene polyadenylate-binding protein 2 Neighboring gene 24.1 kDa heat shock protein, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box protein FBW2
    Names
    F-box domain-containing protein
    F-box protein-like
    Os02g0757700
    P0471A11.28-1
    P0471A11.28-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      32404030..32406987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772062.3 → XP_015627548.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6
      Conserved Domains (2) summary
      cd09293
      Location:105 → 226
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:86 → 109
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. XM_066307720.1 → XP_066163817.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6

    3. XM_066307719.1 → XP_066163816.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6

    4. XM_066307721.1 → XP_066163818.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6

    5. XM_066307717.1 → XP_066163814.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6

    6. XM_066307718.1 → XP_066163815.1  F-box protein FBW2

      UniProtKB/TrEMBL
      A0A0P0VQ80, A2X9T4, Q0DXF2, Q6Z7V6
    Nucleotide Protein
    Heading Accession and Version

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