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    LOC4339581 uncharacterized LOC4339581 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339581, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC4339581
    Gene description
    uncharacterized LOC4339581
    Locus tag
    OSNPB_050557900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339581 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (27929435..27933551, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (27759457..27763642, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene probable ubiquitin-conjugating enzyme E2 24 Neighboring gene large ribosomal subunit protein bL21m Neighboring gene uncharacterized LOC4339582 Neighboring gene berberine bridge enzyme-like 23

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4339581
    Names
    Os05g0557900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      27929435..27933551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783754.2 → XP_015639240.1  uncharacterized protein LOC4339581

      UniProtKB/TrEMBL
      A0A0P0WQ55, Q6I5Z9
      Conserved Domains (1) summary
      cl21494
      Location:233 → 290
      Abhydrolase; alpha/beta hydrolases

    2. XM_015783752.3 → XP_015639238.1  uncharacterized protein LOC4339581

      UniProtKB/TrEMBL
      A0A0P0WQ55, Q6I5Z9
      Conserved Domains (1) summary
      cl21494
      Location:233 → 290
      Abhydrolase; alpha/beta hydrolases

    3. XM_066310625.1 → XP_066166722.1  uncharacterized protein LOC4339581

      UniProtKB/TrEMBL
      A0A0P0WQ55, Q6I5Z9

    4. XM_015783753.3 → XP_015639239.1  uncharacterized protein LOC4339581

      UniProtKB/TrEMBL
      A0A0P0WQ55, Q6I5Z9
      Conserved Domains (1) summary
      cl21494
      Location:233 → 290
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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