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    CALML3 calmodulin like 3 [ Homo sapiens (human) ]

    Gene ID: 810, updated on 9-Dec-2024

    Summary

    Official Symbol
    CALML3provided by HGNC
    Official Full Name
    calmodulin like 3provided by HGNC
    Primary source
    HGNC:HGNC:1452
    See related
    Ensembl:ENSG00000178363 MIM:114184; AllianceGenome:HGNC:1452
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CLP
    Summary
    Predicted to enable calcium ion binding activity. Located in extracellular exosome. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CALML3 in Genome Data Viewer
    Location:
    10p15.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (5524961..5526771)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (5528229..5530040)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (5566924..5568734)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2079 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_13203 Neighboring gene neuroepithelial cell transforming 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_13225 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2080 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5509025-5509661 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5511491-5512062 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5512063-5512634 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5512635-5513206 Neighboring gene CRISPRi-validated cis-regulatory element chr10.219 Neighboring gene CRISPRi-validated cis-regulatory element chr10.222 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5535211-5535389 Neighboring gene Sharpr-MPRA regulatory region 10902 Neighboring gene calmodulin like 5 Neighboring gene CALML3 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5567229-5567928 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5567929-5568629 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5581099-5581598 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5588335-5588834 Neighboring gene uncharacterized LOC105376380 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5595464-5595987 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5595988-5596510 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5599714-5600036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5602693-5603194 Neighboring gene uncharacterized LOC105376381 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5605907-5606133

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular exosome HDA PubMed 
    is_active_in myelin sheath IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    calmodulin-like protein 3
    Names
    caM-like protein
    calmodulin-related protein NB-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_005185.4NP_005176.1  calmodulin-like protein 3

      See identical proteins and their annotated locations for NP_005176.1

      Status: VALIDATED

      Source sequence(s)
      AL732437, BC031889, CU454493, DR421766, HY060230
      Consensus CDS
      CCDS7069.1
      UniProtKB/Swiss-Prot
      B2R9V6, P27482, Q5SQI4
      Related
      ENSP00000315299.1, ENST00000315238.3
      Conserved Domains (1) summary
      PTZ00184
      Location:1149
      PTZ00184; calmodulin; Provisional

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      5524961..5526771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      5528229..5530040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)