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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001009921.3 → NP_001009921.1 vacuolar protein sorting-associated protein 8 homolog isoform a
See identical proteins and their annotated locations for NP_001009921.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1, 3, 4, 5, and 6 all encode the same isoform (a).
- Source sequence(s)
-
AB018347, AC117436, AK056661, BI914013, DA218768, DA340096
- Consensus CDS
-
CCDS46971.1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Related
- ENSP00000487164.1, ENST00000625842.3
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349292.2 → NP_001336221.1 vacuolar protein sorting-associated protein 8 homolog isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (3), as well as variants 1, 4, 5, and 6, encodes isoform a.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Consensus CDS
-
CCDS46971.1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349293.2 → NP_001336222.1 vacuolar protein sorting-associated protein 8 homolog isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (4), as well as variants 1, 3, 5, and 6, encodes isoform a.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Consensus CDS
-
CCDS46971.1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349294.2 → NP_001336223.1 vacuolar protein sorting-associated protein 8 homolog isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (5), as well as variants 1, 3, 4, and 6, encodes isoform a.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Consensus CDS
-
CCDS46971.1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349295.1 → NP_001336224.1 vacuolar protein sorting-associated protein 8 homolog isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (6), as well as variants 1, 3, 4, and 5, encodes isoform a.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Consensus CDS
-
CCDS46971.1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349296.2 → NP_001336225.1 vacuolar protein sorting-associated protein 8 homolog isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) encodes isoform c.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:189 → 226
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:601 → 783
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1243 → 1297
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:91 → 294
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001349297.2 → NP_001336226.1 vacuolar protein sorting-associated protein 8 homolog isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) encodes isoform d.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Conserved Domains (2) summary
-
- pfam12816
Location:41 → 223
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:683 → 737
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
-
NM_001349298.2 → NP_001336227.1 vacuolar protein sorting-associated protein 8 homolog isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) encodes isoform e.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Conserved Domains (2) summary
-
- pfam12816
Location:14 → 196
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:656 → 710
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
-
NM_015303.4 → NP_056118.2 vacuolar protein sorting-associated protein 8 homolog isoform b
See identical proteins and their annotated locations for NP_056118.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC025573, AC107294, AC117436
- Consensus CDS
-
CCDS46972.1
- UniProtKB/TrEMBL
-
C9JJN9
- Related
- ENSP00000404704.2, ENST00000436792.6
- Conserved Domains (4) summary
-
- sd00039
Location:200 → 237
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:612 → 794
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1254 → 1308
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:195 → 296
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_146113.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC025573, AC107294, AC117436
-
NR_146114.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC107294
- Related
-
ENST00000485024.1
-
NR_146115.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC107294
-
NR_146116.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC107294
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
184812166..185052614
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047447824.1 → XP_047303780.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_024453426.2 → XP_024309194.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:614 → 796
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1256 → 1310
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047447823.1 → XP_047303779.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_024453428.2 → XP_024309196.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
- UniProtKB/TrEMBL
-
C9JJN9
- Conserved Domains (4) summary
-
- sd00039
Location:200 → 237
- 7WD40; WD40 repeat [structural motif]
- pfam12816
Location:612 → 794
- Vps8; Golgi CORVET complex core vacuolar protein 8
- cd16687
Location:1254 → 1308
- RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
- cl25539
Location:195 → 296
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_005247253.6 → XP_005247310.1 vacuolar protein sorting-associated protein 8 homolog isoform X4
- UniProtKB/TrEMBL
-
B3KPR6
- Conserved Domains (2) summary
-
- sd00039
Location:202 → 239
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:197 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047447827.1 → XP_047303783.1 vacuolar protein sorting-associated protein 8 homolog isoform X5
-
XM_017006041.3 → XP_016861530.1 vacuolar protein sorting-associated protein 8 homolog isoform X9
-
XM_047447828.1 → XP_047303784.1 vacuolar protein sorting-associated protein 8 homolog isoform X10
-
XM_047447821.1 → XP_047303777.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
-
XM_047447825.1 → XP_047303781.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_047447822.1 → XP_047303778.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
- UniProtKB/Swiss-Prot
- A8K8Q8, B9EIQ1, C9JB61, O94896, Q63HP2, Q8N3P4, Q9BVP9, Q9H9B0
-
XM_047447826.1 → XP_047303782.1 vacuolar protein sorting-associated protein 8 homolog isoform X3
-
XM_011512599.3 → XP_011510901.1 vacuolar protein sorting-associated protein 8 homolog isoform X6
- Conserved Domains (2) summary
-
- pfam12816
Location:83 → 265
- Vps8; Golgi CORVET complex core vacuolar protein 8
- pfam13639
Location:727 → 760
- zf-RING_2; Ring finger domain
-
XM_006713556.5 → XP_006713619.1 vacuolar protein sorting-associated protein 8 homolog isoform X7
- Conserved Domains (2) summary
-
- pfam12816
Location:42 → 224
- Vps8; Golgi CORVET complex core vacuolar protein 8
- pfam13639
Location:686 → 719
- zf-RING_2; Ring finger domain
-
XM_011512600.4 → XP_011510902.1 vacuolar protein sorting-associated protein 8 homolog isoform X8
- Related
-
ENST00000492449.5
- Conserved Domains (2) summary
-
- pfam12816
Location:35 → 217
- Vps8; Golgi CORVET complex core vacuolar protein 8
- pfam13639
Location:679 → 712
- zf-RING_2; Ring finger domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
187627968..187868623
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345891.1 → XP_054201866.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_054345886.1 → XP_054201861.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
-
XM_054345889.1 → XP_054201864.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_054345890.1 → XP_054201865.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_054345894.1 → XP_054201869.1 vacuolar protein sorting-associated protein 8 homolog isoform X4
-
XM_054345895.1 → XP_054201870.1 vacuolar protein sorting-associated protein 8 homolog isoform X5
-
XM_054345899.1 → XP_054201874.1 vacuolar protein sorting-associated protein 8 homolog isoform X9
-
XM_054345900.1 → XP_054201875.1 vacuolar protein sorting-associated protein 8 homolog isoform X10
-
XM_054345887.1 → XP_054201862.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
-
XM_054345892.1 → XP_054201867.1 vacuolar protein sorting-associated protein 8 homolog isoform X2
-
XM_054345888.1 → XP_054201863.1 vacuolar protein sorting-associated protein 8 homolog isoform X1
-
XM_054345893.1 → XP_054201868.1 vacuolar protein sorting-associated protein 8 homolog isoform X3
-
XM_054345896.1 → XP_054201871.1 vacuolar protein sorting-associated protein 8 homolog isoform X6
-
XM_054345897.1 → XP_054201872.1 vacuolar protein sorting-associated protein 8 homolog isoform X7
-
XM_054345898.1 → XP_054201873.1 vacuolar protein sorting-associated protein 8 homolog isoform X8