U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GAT2 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855167, updated on 11-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GAT2
    Primary source
    SGD:S000004744
    Locus tag
    YMR136W
    See related
    AllianceGenome:SGD:S000004744; FungiDB:YMR136W; VEuPathDB:YMR136W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (541199..542881)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Erg29p Neighboring gene glucose-induced degradation complex subunit GID8 Neighboring gene DNA cross-link repair protein PSO2 Neighboring gene Arf family GTPase CIN4

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Microbial evolution. Global epistasis makes adaptation predictable despite sequence-level stochasticity. Kryazhimskiy S, et al. Science, 2014 Jun 27. PMID 24970088, Free PMC Article
    2. Genome-wide transcriptional analysis in S. cerevisiae by mini-array membrane hybridization. Cox KH, et al. Yeast, 1999 Jun 15. PMID 10392447
    3. Four Acyltransferases Uniquely Contribute to Phospholipid Heterogeneity in Saccharomyces cerevisiae. Oelkers P, et al. Lipid Insights, 2016. PMID 27920551, Free PMC Article
    4. Accumulation of lipid production in Chlorella minutissima by triacylglycerol biosynthesis-related genes cloned from Saccharomyces cerevisiae and Yarrowia lipolytica. Hsieh HJ, et al. J Microbiol, 2012 Jun. PMID 22752918
    5. The zinc cluster protein Sut1 contributes to filamentation in Saccharomyces cerevisiae. Foster HA, et al. Eukaryot Cell, 2013 Feb. PMID 23223039, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Gat2p
    NP_013856.1
    • Protein containing GATA family zinc finger motifs; similar to Gln3p and Dal80p; expression repressed by leucine

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      541199..542881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182638.1 → NP_013856.1  TPA: Gat2p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013856.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZV9, P40209
      UniProtKB/TrEMBL
      B5VPR4
      Conserved Domains (1) summary
      COG5641
      Location:25 → 551
      GAT1; GATA Zn-finger-containing transcription factor [Transcription]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40209.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools