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    [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854002, updated on 11-Sep-2024

    Summary

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    Primary source
    SGD:S000005522
    Locus tag
    YOL162W
    See related
    AllianceGenome:SGD:S000005522; FungiDB:YOL162W; VEuPathDB:YOL162W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (10119..10766)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene sulfuric ester hydrolase Neighboring gene uncharacterized protein Neighboring gene seripauperin PAU20 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Emergence of species-specific transporters during evolution of the hemiascomycete phylum. De Hertogh B, et al. Genetics, 2006 Feb. PMID 16118182, Free PMC Article
    2. Transcriptional regulation of the Saccharomyces cerevisiae DAL5 gene family and identification of the high affinity nicotinic acid permease TNA1 (YGR260w). Llorente B, et al. FEBS Lett, 2000 Jun 23. PMID 10869563
    3. Major sulfonate transporter Soa1 in Saccharomyces cerevisiae and considerable substrate diversity in its fungal family. Holt S, et al. Nat Commun, 2017 Feb 6. PMID 28165463, Free PMC Article
    4. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article
    5. Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets. Shin JJ, et al. Dis Model Mech, 2016 Sep 1. PMID 27519690, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables transmembrane transporter activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_014480.1
    • hypothetical protein; proposed to be an inactive evolutionary remnant that along with neighboring gene YOL163W may have constituted a second sulfonate transporter and SOA1 paralog that is intact in S. uvarum, S. eubayanus and S. arboricola and named SOA2; member of the Dal5p subfamily of the major facilitator family

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      10119..10766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183415.1 → NP_014480.1  TPA: uncharacterized protein YOL162W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014480.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1Q8, P0CF19, Q08330, Q08337
      Conserved Domains (1) summary
      cl28910
      Location:1 → 169
      MFS; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CF19.1

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