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    RPL38 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851035, updated on 11-Sep-2024

    Summary

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    Official Symbol
    RPL38
    Primary source
    SGD:S000004317
    Locus tag
    YLR325C
    See related
    AllianceGenome:SGD:S000004317; FungiDB:YLR325C; VEuPathDB:YLR325C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in ribonucleoprotein complex assembly. Part of cytosolic large ribosomal subunit. Orthologous to human RPL38 (ribosomal protein L38). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (781143..781379, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene U2-type spliceosomal complex subunit CWC24 Neighboring gene peroxisome biogenesis protein Neighboring gene uncharacterized protein Neighboring gene Tma10p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Modular Adaptive Ribosome. Yadav A, et al. PLoS One, 2016. PMID 27812193, Free PMC Article
    2. Small and Large Ribosomal Subunit Deficiencies Lead to Distinct Gene Expression Signatures that Reflect Cellular Growth Rate. Cheng Z, et al. Mol Cell, 2019 Jan 3. PMID 30503772, Free PMC Article
    3. Fimbrin phosphorylation by metaphase Cdk1 regulates actin cable dynamics in budding yeast. Miao Y, et al. Nat Commun, 2016 Apr 12. PMID 27068241, Free PMC Article
    4. Ssf1p prevents premature processing of an early pre-60S ribosomal particle. Fatica A, et al. Mol Cell, 2002 Feb. PMID 11864607
    5. The ribosome-bound quality control complex remains associated to aberrant peptides during their proteasomal targeting and interacts with Tom1 to limit protein aggregation. Defenouillère Q, et al. Mol Biol Cell, 2017 May 1. PMID 28298488, Free PMC Article

    See all (80) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IC
    Inferred by Curator
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in protein-RNA complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 60S subunit protein L38
    NP_013429.1
    • Ribosomal 60S subunit protein L38; homologous to mammalian ribosomal protein L38, no bacterial homolog

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      781143..781379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182214.1 → NP_013429.1  TPA: ribosomal 60S subunit protein L38 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013429.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VYW7, P49167
      UniProtKB/TrEMBL
      A7A1K8, B3RHK0, C7GUB0, C8ZDT6, G2WJE6, N1P1L9
      Conserved Domains (1) summary
      pfam01781
      Location:3 → 75
      Ribosomal_L38e; Ribosomal L38e protein family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P49167.1

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