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    Dock2 dedicator of cyto-kinesis 2 [ Mus musculus (house mouse) ]

    Gene ID: 94176, updated on 28-Oct-2024

    Summary

    Official Symbol
    Dock2provided by MGI
    Official Full Name
    dedicator of cyto-kinesis 2provided by MGI
    Primary source
    MGI:MGI:2149010
    See related
    Ensembl:ENSMUSG00000020143 AllianceGenome:MGI:2149010
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hch; MBC; CED-5
    Summary
    Enables GTPase activator activity. Involved in macropinocytosis; myeloid dendritic cell activation involved in immune response; and positive regulation of phagocytosis. Acts upstream of or within several processes, including T cell activation; immunological synapse formation; and membrane raft polarization. Predicted to be located in cytoskeleton; endomembrane system; and membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in central nervous system; paraxial mesenchyme; and retina. Human ortholog(s) of this gene implicated in immunodeficiency 40. Orthologous to human DOCK2 (dedicator of cytokinesis 2). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Biased expression in spleen adult (RPKM 15.3), thymus adult (RPKM 14.5) and 11 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Dock2 in Genome Data Viewer
    Location:
    11 A4; 11 19.68 cM
    Exon count:
    53
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (34176815..34674732, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (34226815..34783905, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12121 Neighboring gene forkhead box I1 Neighboring gene RIKEN cDNA 4930403D09 gene Neighboring gene STARR-seq mESC enhancer starr_29144 Neighboring gene STARR-seq mESC enhancer starr_29145 Neighboring gene inhibitory synaptic factor family member 2B Neighboring gene STARR-seq mESC enhancer starr_29147 Neighboring gene STARR-seq mESC enhancer starr_29148 Neighboring gene STARR-seq mESC enhancer starr_29150 Neighboring gene STARR-positive B cell enhancer mm9_chr11:34444797-34445098 Neighboring gene predicted gene, 29887 Neighboring gene predicted gene, 39681 Neighboring gene STARR-positive B cell enhancer mm9_chr11:34495264-34495565 Neighboring gene STARR-seq mESC enhancer starr_29152 Neighboring gene predicted gene, 51858 Neighboring gene STARR-positive B cell enhancer ABC_E5215 Neighboring gene STARR-positive B cell enhancer ABC_E2983 Neighboring gene STARR-seq mESC enhancer starr_29153 Neighboring gene predicted gene, 53681 Neighboring gene STARR-positive B cell enhancer ABC_E3939 Neighboring gene spindle apparatus coiled-coil protein 1 Neighboring gene predicted gene, 22022

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (19) 
    • Endonuclease-mediated (3) 
    • Spontaneous (1)  1 citation
    • Targeted (5)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTPase activator activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables T cell receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables T cell receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables guanyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables guanyl-nucleotide exchange factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables guanyl-nucleotide exchange factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables small GTPase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within T cell activation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within T cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within alpha-beta T cell activation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within alpha-beta T cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within chemotaxis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cytoskeleton organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within establishment of T cell polarity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within immunological synapse formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in macropinocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within membrane raft polarization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myeloid dendritic cell activation involved in immune response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myoblast fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative thymic T cell selection IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of Rac protein signal transduction IC
    Inferred by Curator
    more info
    PubMed 
    involved_in positive regulation of phagocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive thymic T cell selection IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    dedicator of cytokinesis protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_033374.3NP_203538.2  dedicator of cytokinesis protein 2

      See identical proteins and their annotated locations for NP_203538.2

      Status: VALIDATED

      Source sequence(s)
      AK037611, AK172915, BC040427, CR392356
      Consensus CDS
      CCDS83791.1
      UniProtKB/Swiss-Prot
      Q5SRI4, Q8C3J5, Q99M79
      UniProtKB/TrEMBL
      Q6A0A3
      Related
      ENSMUSP00000090884.6, ENSMUST00000093193.12
      Conserved Domains (4) summary
      cd11706
      Location:11991619
      DHR2_DOCK2; Dock Homology Region 2, a GEF domain, of Class A Dedicator of Cytokinesis 2
      pfam16172
      Location:78414
      DOCK_N; DOCK N-terminus
      cl14603
      Location:422617
      C2; C2 domain
      cl17036
      Location:1267
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      34176815..34674732 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017314862.3XP_017170351.1  dedicator of cytokinesis protein 2 isoform X1

      UniProtKB/TrEMBL
      Q6A0A3
      Conserved Domains (3) summary
      cd11706
      Location:8951315
      DHR2_DOCK2; Dock Homology Region 2, a GEF domain, of Class A Dedicator of Cytokinesis 2
      pfam16172
      Location:12110
      DOCK_N; DOCK N-terminus
      cl14603
      Location:118313
      C2; C2 domain