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    Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 [ Mus musculus (house mouse) ]

    Gene ID: 78255, updated on 28-Oct-2024

    Summary

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    Official Symbol
    Ralgps2provided by MGI
    Official Full Name
    Ral GEF with PH domain and SH3 binding motif 2provided by MGI
    Primary source
    MGI:MGI:1925505
    See related
    Ensembl:ENSMUSG00000026594 AllianceGenome:MGI:1925505
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810020P17Rik; 2210408F11Rik; 4921528G01Rik; 9130014M22Rik
    Summary
    Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in Ras protein signal transduction. Predicted to be located in cytoplasm. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; eye; limb bud; limb segment; and nervous system. Orthologous to human RALGPS2 (Ral GEF with PH domain and SH3 binding motif 2). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Broad expression in testis adult (RPKM 13.7), CNS E14 (RPKM 8.2) and 27 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Ralgps2 in Genome Data Viewer
    Location:
    1 G3; 1 67.71 cM
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (156631736..156767422, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (156804166..156939850, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr1:158682524-158682825 Neighboring gene predicted gene, 39683 Neighboring gene PCNA-associated factor pseudogene Neighboring gene angiopoietin-like 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158834070-158834253 Neighboring gene STARR-positive B cell enhancer ABC_E2572 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158863932-158864133 Neighboring gene RIKEN cDNA 4930439D14 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158868943-158869130 Neighboring gene STARR-positive B cell enhancer ABC_E9487 Neighboring gene STARR-seq mESC enhancer starr_02758 Neighboring gene STARR-positive B cell enhancer ABC_E5828 Neighboring gene STARR-positive B cell enhancer ABC_E4364 Neighboring gene STARR-seq mESC enhancer starr_02759 Neighboring gene STARR-positive B cell enhancer ABC_E2573 Neighboring gene STARR-positive B cell enhancer ABC_E3318 Neighboring gene predicted gene, 39685 Neighboring gene STARR-positive B cell enhancer ABC_E1569 Neighboring gene STARR-positive B cell enhancer mm9_chr1:158957909-158958210 Neighboring gene STARR-seq mESC enhancer starr_02761 Neighboring gene STARR-positive B cell enhancer ABC_E7762 Neighboring gene STARR-positive B cell enhancer ABC_E1232 Neighboring gene STARR-seq mESC enhancer starr_02762 Neighboring gene STARR-positive B cell enhancer ABC_E7763 Neighboring gene predicted gene, 30568

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of a new Ral-GEF expressed in mouse testis. Martegani E, et al. Ann N Y Acad Sci, 2002 Nov. PMID 12485849
    2. Functional analysis of RalGPS2, a murine guanine nucleotide exchange factor for RalA GTPase. Ceriani M, et al. Exp Cell Res, 2007 Jul 1. PMID 17462626
    3. Identification and characterization of a new family of guanine nucleotide exchange factors for the ras-related GTPase Ral. Rebhun JF, et al. J Biol Chem, 2000 May 5. PMID 10747847
    4. ESRP1 Mutations Cause Hearing Loss due to Defects in Alternative Splicing that Disrupt Cochlear Development. Rohacek AM, et al. Dev Cell, 2017 Nov 6. PMID 29107558, Free PMC Article
    5. The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development. Bebee TW, et al. Elife, 2015 Sep 15. PMID 26371508, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RalGPS2 was characterized.
      Title: Functional analysis of RalGPS2, a murine guanine nucleotide exchange factor for RalA GTPase.
    Submit: New GeneRIF Correction

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in Ras protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ras-specific guanine nucleotide-releasing factor RalGPS2
    Names
    ral GEF with PH domain and SH3-binding motif 2
    ralA exchange factor RalGPS2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001159965.1 → NP_001153437.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform a

      See identical proteins and their annotated locations for NP_001153437.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the predominant transcript and encodes the longest isoform (a). Variants 1, 2, and 3 all encode isoform a.
      Source sequence(s)
      AC138109, AK019543, AK033549, BC052663, CJ104104
      Consensus CDS
      CCDS15396.1
      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000063872.7, ENSMUST00000063199.13
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    2. NM_001159966.1 → NP_001153438.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform a

      See identical proteins and their annotated locations for NP_001153438.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode isoform a.
      Source sequence(s)
      AC138109, AK019543, AK033549
      Consensus CDS
      CCDS15396.1
      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000130581.2, ENSMUST00000171292.8
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    3. NM_001159967.1 → NP_001153439.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform b

      See identical proteins and their annotated locations for NP_001153439.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
      Source sequence(s)
      AC138109, AK169368, CJ104104
      Consensus CDS
      CCDS48406.1
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000027886.8, ENSMUST00000027886.14
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:440 → 555
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    4. NM_001159968.1 → NP_001153440.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform c

      See identical proteins and their annotated locations for NP_001153440.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
      Source sequence(s)
      AC138109, AK036803, CJ104104
      Consensus CDS
      CCDS48405.1
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000132533.2, ENSMUST00000172057.8
      Conserved Domains (3) summary
      smart00147
      Location:21 → 251
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:431 → 546
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      pfam00169
      Location:430 → 540
      PH; PH domain

    5. NM_001357391.1 → NP_001344320.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) differs in its 5' UTR and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) has a shorter N-terminus compared to isoform a.
      Source sequence(s)
      AC138109
      Conserved Domains (2) summary
      cd13310
      Location:300 → 415
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    6. NM_001357392.1 → NP_001344321.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7) differs in its 5' UTR and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) has a shorter N-terminus compared to isoform a.
      Source sequence(s)
      AC138109
      Conserved Domains (2) summary
      cd13310
      Location:300 → 415
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    7. NM_023884.4 → NP_076373.3  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform a

      See identical proteins and their annotated locations for NP_076373.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode isoform a.
      Source sequence(s)
      AC138109, AK019543, AK033549, CJ104104
      Consensus CDS
      CCDS15396.1
      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000139645.2, ENSMUST00000191605.7
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      156631736..156767422 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030243663.2 → XP_030099523.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X3

      Conserved Domains (2) summary
      cd13310
      Location:326 → 441
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    2. XM_006497033.2 → XP_006497096.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X3

      Conserved Domains (2) summary
      cd13310
      Location:326 → 441
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    3. XM_030243662.1 → XP_030099522.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X3

      Conserved Domains (2) summary
      cd13310
      Location:326 → 441
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    4. XM_030243657.1 → XP_030099517.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X2

      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:440 → 555
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    5. XM_030243660.1 → XP_030099520.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X2

      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:440 → 555
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    6. XM_030243669.1 → XP_030099529.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X4

      Conserved Domains (2) summary
      cd13310
      Location:300 → 415
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    7. XM_030243656.2 → XP_030099516.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X2

      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:440 → 555
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    8. XM_030243664.2 → XP_030099524.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X3

      Conserved Domains (2) summary
      cd13310
      Location:326 → 441
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    9. XM_030243667.1 → XP_030099527.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X4

      Conserved Domains (2) summary
      cd13310
      Location:300 → 415
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 146
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    10. XM_036154413.1 → XP_036010306.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X5

      Conserved Domains (2) summary
      cd13310
      Location:235 → 350
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
      cl02485
      Location:1 → 55
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    11. XM_006497029.4 → XP_006497092.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1

      See identical proteins and their annotated locations for XP_006497092.1

      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    12. XM_006497028.5 → XP_006497091.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1

      See identical proteins and their annotated locations for XP_006497091.1

      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000140342.2, ENSMUST00000188656.7
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    13. XM_006497032.5 → XP_006497095.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1

      See identical proteins and their annotated locations for XP_006497095.1

      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    14. XM_006497030.4 → XP_006497093.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1

      See identical proteins and their annotated locations for XP_006497093.1

      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Related
      ENSMUSP00000139618.2, ENSMUST00000185198.7
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    15. XM_006497031.5 → XP_006497094.1  ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1

      See identical proteins and their annotated locations for XP_006497094.1

      UniProtKB/Swiss-Prot
      Q7TPZ6, Q80YA6, Q8BZ37, Q8BZU2, Q9D2Y7, Q9ERD6
      UniProtKB/TrEMBL
      Q8C134
      Conserved Domains (2) summary
      smart00147
      Location:45 → 286
      RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
      cd13310
      Location:466 → 581
      PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

    RNA

    1. XR_003947313.2 RNA Sequence

    2. XR_373625.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ERD6.2 GenPept UniProtKB/Swiss-Prot:Q9ERD6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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