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    Fam240b family with sequence similarity 240 member B [ Mus musculus (house mouse) ]

    Gene ID: 68880, updated on 28-Oct-2024

    Summary

    Official Symbol
    Fam240bprovided by MGI
    Official Full Name
    family with sequence similarity 240 member Bprovided by MGI
    Primary source
    MGI:MGI:1916130
    See related
    Ensembl:ENSMUSG00000096537 AllianceGenome:MGI:1916130
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1190003K10Rik
    Summary
    Orthologous to human FAM240B (family with sequence similarity 240 member B). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Fam240b in Genome Data Viewer
    Location:
    13; 13 B3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (64629060..64645606, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (64481246..64497792, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700015C15 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:64533677-64533786 Neighboring gene cyclin dependent kinase 20 Neighboring gene predicted gene, 31218 Neighboring gene BTB (POZ) domain containing 3 pseudogene Neighboring gene SNW domain containing 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34830 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene 13_866.1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195435.1NP_001182364.1  protein FAM240B

      Status: VALIDATED

      Source sequence(s)
      AK004471, CT025616
      Consensus CDS
      CCDS56887.1
      UniProtKB/TrEMBL
      J3QMB3
      Related
      ENSMUSP00000136210.2, ENSMUST00000180282.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      64629060..64645606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006517360.3XP_006517423.2  protein FAM240B isoform X1

      UniProtKB/TrEMBL
      J3QMB3