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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_017829.6 → NP_060299.4 haloacid dehalogenase-like hydrolase domain-containing 5 isoform 1
See identical proteins and their annotated locations for NP_060299.4
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter isoform (1).
- Source sequence(s)
-
AF273270, BF515203
- Consensus CDS
-
CCDS13741.1
- UniProtKB/Swiss-Prot
-
Q9BXW7
- Related
- ENSP00000155674.5, ENST00000155674.9
- Conserved Domains (2) summary
-
- TIGR01456
Location:17 → 330
- CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
- pfam13344
Location:19 → 122
- Hydrolase_6; Haloacid dehalogenase-like hydrolase
-
NM_033070.3 → NP_149061.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform 2 precursor
See identical proteins and their annotated locations for NP_149061.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate first exon compared to variant 1. The resulting isoform (2) is longer and has a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AF273271, AK000461, BF515203, BM558767
- Consensus CDS
-
CCDS33595.1
- UniProtKB/Swiss-Prot
- B2RCK5, Q9BXW7, Q9BXW8, Q9NWA8, Q9NX41
- Related
- ENSP00000337358.4, ENST00000336737.8
- Conserved Domains (2) summary
-
- TIGR01456
Location:47 → 360
- CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
- pfam13344
Location:49 → 152
- Hydrolase_6; Haloacid dehalogenase-like hydrolase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
17137520..17165287 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011546126.4 → XP_011544428.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X1
- Conserved Domains (2) summary
-
- TIGR01456
Location:42 → 292
- CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
- cl21460
Location:43 → 84
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011546127.2 → XP_011544429.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X2
- Conserved Domains (1) summary
-
- TIGR01456
Location:1 → 238
- CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
-
XM_005261236.5 → XP_005261293.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X3
- UniProtKB/TrEMBL
-
B3KVW8
- Conserved Domains (1) summary
-
- TIGR01456
Location:1 → 199
- CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
-
XM_047441340.1 → XP_047297296.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X5
- UniProtKB/TrEMBL
-
B3KVW8
- Related
-
ENST00000486462.1
-
XM_047441339.1 → XP_047297295.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
17814107..17841872 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054325562.1 → XP_054181537.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X1
-
XM_054325563.1 → XP_054181538.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X2
-
XM_054325564.1 → XP_054181539.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X3
- UniProtKB/TrEMBL
-
B3KVW8
-
XM_054325566.1 → XP_054181541.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X5
- UniProtKB/TrEMBL
-
B3KVW8
-
XM_054325565.1 → XP_054181540.1 haloacid dehalogenase-like hydrolase domain-containing 5 isoform X4