U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    KIAA1671 KIAA1671 [ Homo sapiens (human) ]

    Gene ID: 85379, updated on 6-Oct-2024

    Summary

    Official Symbol
    KIAA1671provided by HGNC
    Official Full Name
    KIAA1671provided by HGNC
    Primary source
    HGNC:HGNC:29345
    See related
    Ensembl:ENSG00000197077 AllianceGenome:HGNC:29345
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in thyroid (RPKM 12.1), esophagus (RPKM 8.5) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See KIAA1671 in Genome Data Viewer
    Location:
    22q11.23
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (24952716..25197448)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (25414302..25658633)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (25348683..25593415)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene small G protein signaling modulator 1 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:25307870-25308029 Neighboring gene Sharpr-MPRA regulatory region 9438 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13557 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:25354355-25354854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:25365545-25366128 Neighboring gene LHFPL tetraspan subfamily member 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:25390751-25391348 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:25398411-25398910 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr22:25421915-25423114 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:25457216-25458130 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:25462486-25463045 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:25465590-25466140 Neighboring gene Sharpr-MPRA regulatory region 10625 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:25494863-25495382 Neighboring gene KIAA1671 antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:25506614-25507476 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:25507477-25508338 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63138 Neighboring gene Sharpr-MPRA regulatory region 2564 Neighboring gene Sharpr-MPRA regulatory region 1539 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63172 Neighboring gene STMN3 pseudogene 1 Neighboring gene crystallin beta B3 Neighboring gene crystallin beta B2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    uncharacterized protein KIAA1671
    Names
    CTA-221G9.5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001145206.2NP_001138678.1  uncharacterized protein KIAA1671 isoform 2

      See identical proteins and their annotated locations for NP_001138678.1

      Status: VALIDATED

      Source sequence(s)
      AL022323, AL050312, Z99916
      Consensus CDS
      CCDS46676.1
      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
      Related
      ENSP00000351207.3, ENST00000358431.8
      Conserved Domains (2) summary
      PHA03247
      Location:36271
      PHA03247; large tegument protein UL36; Provisional
      pfam15327
      Location:16301797
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    2. NM_001386930.1NP_001373859.1  uncharacterized protein KIAA1671 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL022323, AL050312, Z99916
      Conserved Domains (2) summary
      PHA03247
      Location:36271
      PHA03247; large tegument protein UL36; Provisional
      pfam15327
      Location:16301781
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    3. NM_001386932.1NP_001373861.1  uncharacterized protein KIAA1671 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL022323, AL050312, Z99916
      Consensus CDS
      CCDS46676.1
      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
      Conserved Domains (2) summary
      PHA03247
      Location:36271
      PHA03247; large tegument protein UL36; Provisional
      pfam15327
      Location:16301797
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    4. NM_001386933.1NP_001373862.1  uncharacterized protein KIAA1671 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL022323, AL050312, Z99916
      Consensus CDS
      CCDS46676.1
      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
      Related
      ENSP00000385152.3, ENST00000406486.8
      Conserved Domains (2) summary
      PHA03247
      Location:36271
      PHA03247; large tegument protein UL36; Provisional
      pfam15327
      Location:16301797
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    5. NM_001386934.1NP_001373863.1  uncharacterized protein KIAA1671 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL022323, Z99916
      Consensus CDS
      CCDS93136.1
      UniProtKB/TrEMBL
      A0A1B0GVJ7
      Related
      ENSP00000490544.1, ENST00000637069.1
      Conserved Domains (1) summary
      pfam15327
      Location:215382
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    6. NM_001386935.1NP_001373864.1  uncharacterized protein KIAA1671 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AL022323, Z99916
      Consensus CDS
      CCDS93135.1
      Related
      ENSP00000385377.1, ENST00000401395.1
      Conserved Domains (1) summary
      pfam15327
      Location:137304
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      24952716..25197448
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047441556.1XP_047297512.1  uncharacterized protein KIAA1671 isoform X1

      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
    2. XM_006724346.3XP_006724409.1  uncharacterized protein KIAA1671 isoform X1

      See identical proteins and their annotated locations for XP_006724409.1

      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
      Conserved Domains (2) summary
      PHA03247
      Location:36271
      PHA03247; large tegument protein UL36; Provisional
      pfam15327
      Location:16301797
      Tankyrase_bdg_C; Tankyrase binding protein C terminal domain
    3. XM_047441557.1XP_047297513.1  uncharacterized protein KIAA1671 isoform X2

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      25414302..25658633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054326068.1XP_054182043.1  uncharacterized protein KIAA1671 isoform X1

      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
    2. XM_054326067.1XP_054182042.1  uncharacterized protein KIAA1671 isoform X1

      UniProtKB/Swiss-Prot
      B0QYF2, B7ZW08, Q5THZ5, Q9BY89
    3. XM_054326069.1XP_054182044.1  uncharacterized protein KIAA1671 isoform X2