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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001270691.2 → NP_001257620.1 spermine oxidase isoform 6
See identical proteins and their annotated locations for NP_001257620.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) has an additional in-frame segment of the coding region, compared to variant 1. It encodes a longer isoform (6), also known as SMOX5 or SMO5, that has an additional internal segment compared to isoform 1.
- Source sequence(s)
-
AW136764, AY358104, BG679874, EF032141
- Consensus CDS
-
CCDS74702.1
- UniProtKB/TrEMBL
-
B4DE63
- Related
- ENSP00000478305.1, ENST00000621355.4
- Conserved Domains (2) summary
-
- PLN02568
Location:50 → 578
- PLN02568; polyamine oxidase
- pfam13450
Location:45 → 88
- NAD_binding_8; NAD(P)-binding Rossmann-like domain
-
NM_175839.3 → NP_787033.1 spermine oxidase isoform 1
See identical proteins and their annotated locations for NP_787033.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the most abundant transcript and encodes isoform (1), also known as PAOh1.
- Source sequence(s)
-
AW136764, AY358104, BG679874, EF032141
- Consensus CDS
-
CCDS13075.1
- UniProtKB/Swiss-Prot
- A2A2P5, A2A2P6, A8BE87, D3DVZ4, Q5TE26, Q5TE27, Q6UY28, Q8IX00, Q96LC3, Q96LC4, Q96QT3, Q9BW38, Q9H6H1, Q9NP51, Q9NPY1, Q9NPY2, Q9NWM0
- UniProtKB/TrEMBL
-
B4DE63
- Related
- ENSP00000307252.4, ENST00000305958.9
- Conserved Domains (2) summary
-
- PLN02568
Location:50 → 548
- PLN02568; polyamine oxidase
- pfam13450
Location:45 → 88
- NAD_binding_8; NAD(P)-binding Rossmann-like domain
-
NM_175840.3 → NP_787034.1 spermine oxidase isoform 2
See identical proteins and their annotated locations for NP_787034.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment of the coding region, compared to variant 1. It encodes a shorter isoform (2), also known as PAOh2, that is missing an internal segment compared to isoform 1.
- Source sequence(s)
-
AW136764, AY358104, BG679874, EF032141
- Consensus CDS
-
CCDS13076.1
- UniProtKB/TrEMBL
-
B4DE63
- Related
- ENSP00000344595.6, ENST00000339123.10
- Conserved Domains (1) summary
-
- cl27535
Location:50 → 495
- Amino_oxidase; Flavin containing amine oxidoreductase
-
NM_175841.3 → NP_787035.1 spermine oxidase isoform 3
See identical proteins and their annotated locations for NP_787035.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame segment of the coding region, compared to variant 1. It encodes a shorter isoform (3), also known as PAOh3, that is missing an internal segment compared to isoform 1.
- Source sequence(s)
-
AW136764, AY033891, BG679874
- Consensus CDS
-
CCDS13077.1
- UniProtKB/Swiss-Prot
-
Q9NWM0
- Related
- ENSP00000341775.2, ENST00000346595.6
- Conserved Domains (1) summary
-
- cl27535
Location:146 → 183
- Amino_oxidase; Flavin containing amine oxidoreductase
-
NM_175842.3 → NP_787036.1 spermine oxidase isoform 4
See identical proteins and their annotated locations for NP_787036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 4, also known as PAOh4, which is shorter than isoform 1.
- Source sequence(s)
-
AW136764, AY358104, BG679874, EF032141
- Consensus CDS
-
CCDS13078.1
- UniProtKB/TrEMBL
-
B4DE63
- Related
- ENSP00000278795.3, ENST00000278795.7
- Conserved Domains (1) summary
-
- cl27535
Location:50 → 525
- Amino_oxidase; Flavin containing amine oxidoreductase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
4148828..4187727
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047440218.1 → XP_047296174.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_047440222.1 → XP_047296178.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
-
XM_011529261.3 → XP_011527563.1 spermine oxidase isoform X1
See identical proteins and their annotated locations for XP_011527563.1
- UniProtKB/TrEMBL
-
B4DE63
- Conserved Domains (2) summary
-
- PLN02568
Location:50 → 578
- PLN02568; polyamine oxidase
- pfam13450
Location:45 → 88
- NAD_binding_8; NAD(P)-binding Rossmann-like domain
-
XM_047440220.1 → XP_047296176.1 spermine oxidase isoform X2
- UniProtKB/Swiss-Prot
- A2A2P5, A2A2P6, A8BE87, D3DVZ4, Q5TE26, Q5TE27, Q6UY28, Q8IX00, Q96LC3, Q96LC4, Q96QT3, Q9BW38, Q9H6H1, Q9NP51, Q9NPY1, Q9NPY2, Q9NWM0
- UniProtKB/TrEMBL
-
B4DE63
- Related
- ENSP00000368773.2, ENST00000379460.6
-
XM_047440223.1 → XP_047296179.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
-
XM_047440217.1 → XP_047296173.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_047440219.1 → XP_047296175.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_047440221.1 → XP_047296177.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
4183413..4222031
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054323545.1 → XP_054179520.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323550.1 → XP_054179525.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323546.1 → XP_054179521.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323548.1 → XP_054179523.1 spermine oxidase isoform X2
- UniProtKB/Swiss-Prot
- A2A2P5, A2A2P6, A8BE87, D3DVZ4, Q5TE26, Q5TE27, Q6UY28, Q8IX00, Q96LC3, Q96LC4, Q96QT3, Q9BW38, Q9H6H1, Q9NP51, Q9NPY1, Q9NPY2, Q9NWM0
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323551.1 → XP_054179526.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323544.1 → XP_054179519.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323547.1 → XP_054179522.1 spermine oxidase isoform X1
- UniProtKB/TrEMBL
-
B4DE63
-
XM_054323549.1 → XP_054179524.1 spermine oxidase isoform X3
- UniProtKB/TrEMBL
-
B4DE63
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_019025.2: Suppressed sequence
- Description
- NM_019025.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.