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    RRT14 Rrt14p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854679, updated on 29-Jun-2024

    Summary

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    Gene symbol
    RRT14
    Gene description
    Rrt14p
    Primary source
    FungiDB:YIL127C
    Locus tag
    YIL127C
    See related
    SGD:S000001389; AllianceGenome:SGD:S000001389; VEuPathDB:YIL127C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in nucleolus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RRT14 in Genome Data Viewer
    Location:
    chromosome: IX
    Exon count:
    1
    Sequence:
    Chromosome: IX; NC_001141.2 (117024..117644, complement)

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Tao3p Neighboring gene Met18p Neighboring gene RSC chromatin remodeling complex ATPase subunit STH1 Neighboring gene alpha-ketoglutarate dehydrogenase KGD1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001141.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Wade CH, et al. Yeast, 2006 Mar. PMID 16544271
    2. Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae. Hontz RD, et al. Genetics, 2009 May. PMID 19270272, Free PMC Article
    3. Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome. Zhao Y, et al. Commun Biol, 2022 Jun 1. PMID 35650250, Free PMC Article
    4. The Genetic and Physical Interactomes of the Saccharomyces cerevisiae Hrq1 Helicase. Rogers CM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33115721, Free PMC Article
    5. Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Lau B, et al. Mol Cell, 2021 Jan 21. PMID 33326748

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus HDA PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Rrt14p
    NP_012139.1
    • hypothetical protein; identified in a screen for mutants with decreased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2 Reference assembly

      Range
      117024..117644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179475.1 → NP_012139.1  TPA: Rrt14p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012139.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B5VKI1, D6VVG0, P40470
      UniProtKB/TrEMBL
      A0A8H4BZ20
      Conserved Domains (1) summary
      pfam17075
      Location:6 → 196
      RRT14; Regular of rDNA transcription protein 14
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40470.1

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