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    smim10l3 small integral membrane protein 10 like 3 [ Danio rerio (zebrafish) ]

    Gene ID: 797202, updated on 12-Sep-2024

    Summary

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    Gene symbol
    smim10l3
    Gene description
    small integral membrane protein 10 like 3
    See related
    Ensembl:ENSDARG00000100331
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    human mouse all
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    Genomic context

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    See smim10l3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (56565297..56569968, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (56497861..56502532, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 5b Neighboring gene cytohesin 3b Neighboring gene Rac family small GTPase 1b Neighboring gene serine/threonine kinase 19

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    salivary gland specific protein SAGSIN1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163443.1 → NP_001156915.1  salivary gland specific protein SAGSIN1

      Status: PROVISIONAL

      Source sequence(s)
      BC122141
      UniProtKB/TrEMBL
      A0A0G2L765, A0A8M1NRY1
      Related
      ENSDARP00000140618.1, ENSDART00000165317.2
      Conserved Domains (1) summary
      pfam15118
      Location:2 → 59
      DUF4560; Domain of unknown function (DUF4560)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      56565297..56569968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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