arl2 ADP-ribosylation factor-like 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: arl2provided by ZNC
Official Full Name: ADP-ribosylation factor-like 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-19
See related: Ensembl:ENSDARG00000069496 AllianceGenome:ZFIN:ZDB-GENE-041010-19
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:103658
Summary: Predicted to enable GTP binding activity. Predicted to be involved in protein folding. Predicted to be located in centrosome. Predicted to be active in cytoplasm and microtubule cytoskeleton. Orthologous to human ARL2 (ADP ribosylation factor like GTPase 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (25047219..25049360, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (24776062..24778203, complement)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables GTP binding	IBA Inferred from Biological aspect of Ancestor more info
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein folding	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in centrosome	IEA Inferred from Electronic Annotation more info
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in microtubule cytoskeleton	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: ADP-ribosylation factor-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005947.1 → NP_001005947.1 ADP-ribosylation factor-like protein 2

See identical proteins and their annotated locations for NP_001005947.1

Status: PROVISIONAL

Source sequence(s)

BC083457

UniProtKB/TrEMBL

Q5XJ51

Related

ENSDARP00000071659.3, ENSDART00000077191.4

Conserved Domains (2) summary

cd04154
Location:3 → 175

Arl2; Arf-like 2 (Arl2) GTPase

TIGR00231
Location:16 → 170

small_GTP; small GTP-binding protein domain