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    tmem192 transmembrane protein 192 [ Danio rerio (zebrafish) ]

    Gene ID: 797335, updated on 2-Nov-2024

    Summary

    Official Symbol
    tmem192provided by ZNC
    Official Full Name
    transmembrane protein 192provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2254
    See related
    Ensembl:ENSDARG00000037484 AllianceGenome:ZFIN:ZDB-GENE-040426-2254
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:77068
    Summary
    Predicted to be located in endosome; lysosome; and membrane. Predicted to be active in late endosome and lysosomal membrane. Orthologous to human TMEM192 (transmembrane protein 192). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See tmem192 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (19649528..19665550)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (18956591..18972613)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene F-box protein 10 Neighboring gene RNA polymerase I subunit E Neighboring gene apelin receptor early endogenous ligand Neighboring gene si:ch211-42i9.5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC77068, MGC171754

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in late endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in lysosomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102393.1NP_001095863.1  transmembrane protein 192

      See identical proteins and their annotated locations for NP_001095863.1

      Status: PROVISIONAL

      Source sequence(s)
      BC150390
      UniProtKB/Swiss-Prot
      A7E2K3, Q6NYE7
      Related
      ENSDARP00000054574.5, ENSDART00000054575.6
      Conserved Domains (1) summary
      pfam14802
      Location:31264
      TMEM192; TMEM192 family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      19649528..19665550
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394474.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      186726..202748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)