cidec cell death inducing DFFA like effector c [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cidecprovided by ZNC
Official Full Name: cell death inducing DFFA like effector cprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-4591
See related: Ensembl:ENSDARG00000059651 AllianceGenome:ZFIN:ZDB-GENE-030131-4591
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fd36c01; wu:fd36c01; zgc:153033; si:dkey-91f15.6
Summary: Predicted to be involved in regulation of apoptotic process. Human ortholog(s) of this gene implicated in familial partial lipodystrophy type 5. Orthologous to human CIDEC (cell death inducing DFFA like effector c). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 6

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (21202668..21212087)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (19142446..19151865)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within apoptotic process	IEA Inferred from Electronic Annotation more info
involved_in apoptotic process	IEA Inferred from Electronic Annotation more info
involved_in regulation of apoptotic process	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: cell death activator CIDE-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045047.1 → NP_001038512.1 cell death activator CIDE-3

See identical proteins and their annotated locations for NP_001038512.1

Status: PROVISIONAL

Source sequence(s)

BC122122

UniProtKB/TrEMBL

B2GRD1, Q0P4E5

Related

ENSDARP00000077561.5, ENSDART00000083126.6

Conserved Domains (1) summary

cd06538
Location:36 → 114

CIDE_N_FSP27; CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and ...