shisa2a shisa family member 2a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: shisa2aprovided by ZNC
Official Full Name: shisa family member 2aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030925-31
See related: Ensembl:ENSDARG00000034138 AllianceGenome:ZFIN:ZDB-GENE-030925-31
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: shisa2; tmem46; sb:cb803; sb:cb818; wu:fa06h09; zgc:100929
Summary: Predicted to be located in membrane. Is expressed in several structures, including ectoderm; immature eye; musculature system; nervous system; and neural keel. Orthologous to human SHISA2 (shisa family member 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 5

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (22067570..22070229)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (21563770..21566429)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fa02h11.r1 (e-PCR)
- UniSTS:189518

aa494997 (e-PCR)
- UniSTS:186846

fa06h09.s1 (e-PCR)
- UniSTS:202235

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: shisa family member 2a

Names: ZShisa; shisa family member 2; shisa homolog 2; transmembrane protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.