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    fam221a family with sequence similarity 221 member A [ Danio rerio (zebrafish) ]

    Gene ID: 541338, updated on 9-Dec-2024

    Summary

    Official Symbol
    fam221aprovided by ZNC
    Official Full Name
    family with sequence similarity 221 member Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050320-27
    See related
    Ensembl:ENSDARG00000027599 AllianceGenome:ZFIN:ZDB-GENE-050320-27
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:112024
    Summary
    Is expressed in habenula and peripheral olfactory organ. Orthologous to human FAM221A (family with sequence similarity 221 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fam221a in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (20157985..20163232, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (20574334..20578732, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene neuropeptide Y Neighboring gene uncharacterized LOC137488505 Neighboring gene coiled-coil domain containing 126 Neighboring gene transformer 2 alpha homolog

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013466.2NP_001013484.2  protein FAM221A

      Status: VALIDATED

      Source sequence(s)
      BX469899
      UniProtKB/TrEMBL
      Q5BJC9
      Related
      ENSDARP00000151141.1, ENSDART00000184605.1

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      20157985..20163232 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068215124.1XP_068071225.1  protein FAM221A isoform X1

      UniProtKB/TrEMBL
      Q5BJC9
      Related
      ENSDARP00000120859.2, ENSDART00000148179.4
    2. XM_068215125.1XP_068071226.1  protein FAM221A isoform X2

      UniProtKB/TrEMBL
      Q5BJC9