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    lyrm9 LYR motif containing 9 [ Danio rerio (zebrafish) ]

    Gene ID: 563525, updated on 2-Nov-2024

    Summary

    Official Symbol
    lyrm9provided by ZNC
    Official Full Name
    LYR motif containing 9provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081022-28
    See related
    Ensembl:ENSDARG00000075528 AllianceGenome:ZFIN:ZDB-GENE-081022-28
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:193694; zgc:193700
    Summary
    Orthologous to human LYRM9 (LYR motif containing 9). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See lyrm9 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (30310835..30311953)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (30430094..30431212)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene nuclear FMR1 interacting protein 2 Neighboring gene uncharacterized LOC137487766 Neighboring gene nemo-like kinase, type 2 Neighboring gene nitric oxide synthase 2b, inducible Neighboring gene mitochondrial ribosomal protein S23

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    LYR motif-containing protein 9
    Names
    UPF0631 protein C17orf108 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001159983.2NP_001153455.1  LYR motif-containing protein 9

      See identical proteins and their annotated locations for NP_001153455.1

      Status: VALIDATED

      Source sequence(s)
      BX649531, EH552928, EH574050
      UniProtKB/Swiss-Prot
      B3DFV0
      Related
      ENSDARP00000100356.2, ENSDART00000112784.4
      Conserved Domains (1) summary
      pfam13232
      Location:1170
      Complex1_LYR_1; Complex1_LYR-like

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      30310835..30311953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)