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    LOC9268205 uncharacterized LOC9268205 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9268205, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9268205
    Gene description
    uncharacterized LOC9268205
    Locus tag
    OSNPB_050355133
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Biased expression in flowers (RPKM 2.5) and flower buds (RPKM 1.9) See more
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    Genomic context

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    See LOC9268205 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (16927037..16936916)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (16830070..16839968)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene protein trichome birefringence-like 28 Neighboring gene uncharacterized LOC136356654 Neighboring gene pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like Neighboring gene uncharacterized LOC4338514 Neighboring gene uncharacterized LOC4338515

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9268205
    Names
    Os05g0355133
    protein FAM91A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      16927037..16936916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783276.3 → XP_015638762.1  uncharacterized protein LOC9268205 isoform X1

      UniProtKB/TrEMBL
      B9FP35, Q5W6Z1
      Conserved Domains (2) summary
      pfam14647
      Location:19 → 308
      FAM91_N; FAM91 N-terminus
      pfam14648
      Location:366 → 850
      FAM91_C; FAM91 C-terminus

    2. XM_015783278.3 → XP_015638764.1  uncharacterized protein LOC9268205 isoform X2

      UniProtKB/TrEMBL
      A0A0N7KKL6, B8AX29
      Conserved Domains (2) summary
      pfam14647
      Location:19 → 307
      FAM91_N; FAM91 N-terminus
      pfam14648
      Location:365 → 849
      FAM91_C; FAM91 C-terminus
    Nucleotide Protein
    Heading Accession and Version

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