U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4329157 predicted GPI-anchored protein 58 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329157, updated on 12-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC4329157
    Gene description
    predicted GPI-anchored protein 58
    Locus tag
    OSNPB_020318400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1134_B09.13
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC4329157 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (12691643..12692666, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (12656253..12657365, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene ubiquinol oxidase 2, mitochondrial Neighboring gene uncharacterized LOC9268512 Neighboring gene ABC transporter G family member 40 Neighboring gene F-box/FBD/LRR-repeat protein At5g22700-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    predicted GPI-anchored protein 58
    Names
    OSJNBa0086N11.1
    Os02g0318400
    pre-mRNA-splicing factor CWC22

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      12691643..12692666 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769391.3 → XP_015624877.1  predicted GPI-anchored protein 58

      UniProtKB/TrEMBL
      B7E9U4
      Conserved Domains (1) summary
      PRK14951
      Location:48 → 150
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials