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    LOC4349207 probable glutathione S-transferase GSTU6 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349207, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349207
    Gene description
    probable glutathione S-transferase GSTU6
    Locus tag
    OSNPB_100530900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    GSTU6
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    Genomic context

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    See LOC4349207 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (21325571..21326634)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (20633321..20634945)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene probable glutathione S-transferase GSTU6 Neighboring gene probable glutathione S-transferase GSTU6 Neighboring gene uncharacterized LOC136353572 Neighboring gene probable glutathione S-transferase GSTU6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organisation and structural evolution of the rice glutathione S-transferase gene family. Soranzo N, et al. Mol Genet Genomics, 2004 Jun. PMID 15069639
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutathione metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable glutathione S-transferase GSTU6
    Names
    28 kDa cold-induced protein
    LOC_Os10g38740
    OSJNBb0038A07.2
    putative glutathione S-transferase OsGSTU6
    NP_001390982.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001404053.1 → NP_001390982.1  probable glutathione S-transferase GSTU6

      Status: VALIDATED

      Source sequence(s)
      CI031991, CI261207, CI639714
      UniProtKB/Swiss-Prot
      B7E411, Q06398, Q0IW60, Q9FUE6
      UniProtKB/TrEMBL
      A2Z9M2, A3C6Q9

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      21325571..21326634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q06398.2 GenPept UniProtKB/Swiss-Prot:Q06398

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