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    LOC4342250 uncharacterized LOC4342250 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342250, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342250
    Gene description
    uncharacterized LOC4342250
    Locus tag
    OSNPB_070115200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1138_B05.113
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    Genomic context

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    See LOC4342250 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (844779..846230, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (834293..835740, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4342249 Neighboring gene uncharacterized LOC136357306 Neighboring gene peroxidase 50 Neighboring gene receptor-like protein EIX1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC4342250
    Names
    Os07g0115200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      844779..846230 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790762.3 → XP_015646248.1  uncharacterized protein LOC4342250

      UniProtKB/TrEMBL
      A2YHJ7, Q0D905, Q8H2P1
      Conserved Domains (1) summary
      pfam12620
      Location:222 → 243
      DUF3778; Protein of unknown function (DUF3778)
    Nucleotide Protein
    Heading Accession and Version

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