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    LOC4342042 uncharacterized LOC4342042 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342042, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342042
    Gene description
    uncharacterized LOC4342042
    Locus tag
    OSNPB_060712200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1663_H12.20
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    Genomic context

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    See LOC4342042 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30986412..30987423)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (30117087..30118758)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene non-specific lipid transfer protein GPI-anchored 9 Neighboring gene branchpoint-bridging protein-like Neighboring gene lysophospholipid acyltransferase LPEAT2 Neighboring gene uncharacterized LOC4342044

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4342042
    Names
    Os06g0712200
    P0655A07.53

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      30986412..30987423
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785887.3 → XP_015641373.1  uncharacterized protein LOC4342042

      UniProtKB/TrEMBL
      A0A0P0X112, A2YGX1, Q0D9K4, Q5Z802
      Conserved Domains (1) summary
      cl00447
      Location:119 → 183
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
    Nucleotide Protein
    Heading Accession and Version

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