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    LOC9266683 uncharacterized LOC9266683 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9266683, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9266683
    Gene description
    uncharacterized LOC9266683
    Locus tag
    OSNPB_020197900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1524_D08.35
    Expression
    Broad expression in flower buds (RPKM 57.8), flowers (RPKM 13.7) and 6 other tissues See more
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    Genomic context

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    See LOC9266683 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (5493299..5499890)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (5482733..5489271)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene B3 domain-containing protein LOC_Os02g10420 Neighboring gene uncharacterized LOC4328625 Neighboring gene uncharacterized LOC4328627 Neighboring gene probable calcium-binding protein CML21

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9266683
    Names
    Os02g0197900
    P0026H03.10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      5493299..5499890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015767293.3 → XP_015622779.1  uncharacterized protein LOC9266683

      UniProtKB/TrEMBL
      B8ADS4
      Conserved Domains (1) summary
      COG1073
      Location:55 → 264
      FrsA; Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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