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    LOC4331382 kinesin-like protein KIN-14E [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331382, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC4331382
    Gene description
    kinesin-like protein KIN-14E
    Locus tag
    OSNPB_030114000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    KIN14E; OsJ_09155
    Expression
    Biased expression in flower buds (RPKM 5.0), flowers (RPKM 1.7) and 2 other tissues See more
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    Genomic context

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    See LOC4331382 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (785285..791703)

    Chromosome 3 - NC_029258.1Genomic Context describing neighboring genes Neighboring gene protein HLB1 Neighboring gene uncharacterized LOC4331381 Neighboring gene uncharacterized LOC4331383 Neighboring gene probable RNA-binding protein EIF1AD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029258.1 Chromosome 3 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinesin-like protein KIN-14E
    Names
    LOC_Os03g02290
    OSJNBa0090O10.9
    kinesin-like protein KIF3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417163.1 → NP_001404092.1  kinesin-like protein KIN-14E isoform 1

      Status: VALIDATED

      Source sequence(s)
      AP014959
      UniProtKB/Swiss-Prot
      B9FAF3, Q0DVT4, Q10SQ9, Q10SR0, Q8GZX4

    2. NM_001417164.1 → NP_001404093.1  kinesin-like protein KIN-14E isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK063381, AP014959
      UniProtKB/Swiss-Prot
      B9FAF3, Q0DVT4, Q10SQ9, Q10SR0, Q8GZX4

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029258.1 Reference IRGSP-1.0 Primary Assembly

      Range
      785285..791703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773546.2 → XP_015629032.1  kinesin-like protein KIN-14E isoform X2

      Conserved Domains (3) summary
      COG1196
      Location:748 → 1022
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01366
      Location:413 → 739
      KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
      pfam11721
      Location:76 → 221
      Malectin; Di-glucose binding within endoplasmic reticulum

    2. XM_015773545.2 → XP_015629031.1  kinesin-like protein KIN-14E isoform X1

      Conserved Domains (3) summary
      COG1196
      Location:748 → 932
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01366
      Location:413 → 739
      KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
      pfam11721
      Location:76 → 221
      Malectin; Di-glucose binding within endoplasmic reticulum
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B9FAF3.1 GenPept UniProtKB/Swiss-Prot:B9FAF3

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