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    LOC4338633 probable calcium-binding protein CML15 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338633, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4338633
    Gene description
    probable calcium-binding protein CML15
    Locus tag
    OSNPB_050380900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CML15
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    Genomic context

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    See LOC4338633 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (18507878..18508854, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (18406496..18407468, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9266929 Neighboring gene disease resistance protein PIK6-NP-like Neighboring gene uncharacterized LOC136356667 Neighboring gene Membrane protein PM19L

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable calcium-binding protein CML15
    Names
    Calmodulin-like protein 15
    LOC_Os05g31620
    OSJNBa0088M05.6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420460.1 → NP_001407389.1  probable calcium-binding protein CML15

      Status: VALIDATED

      Source sequence(s)
      AU082899, CI281063, CI646670
      UniProtKB/Swiss-Prot
      B7ED70, Q6L4D4
      UniProtKB/TrEMBL
      A2Y430, A2Y433

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      18507878..18508854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6L4D4.1 GenPept UniProtKB/Swiss-Prot:Q6L4D4

    Gene LinkOut

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