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    LOC4342722 seed allergenic protein RAG1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342722, updated on 16-Jul-2024

    Summary

    Gene symbol
    LOC4342722
    Gene description
    seed allergenic protein RAG1-like
    Locus tag
    OSNPB_070214100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    RA17; RAG1; OJ1116_C08.112
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    Genomic context

    See LOC4342722 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (6332485..6333250, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (6254881..6255622, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene seed allergenic protein RAG1-like Neighboring gene seed allergenic protein RAG2-like Neighboring gene seed allergenic protein RAG2-like Neighboring gene alpha-amylase/trypsin inhibitor RA16-like

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    seed allergenic protein RAG1
    Names
    LOC_Os07g11360
    Seed allergenic protein RA17
    allergenic protein
    seed allergen RA17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422060.1NP_001408989.1  seed allergenic protein RAG1 precursor

      Status: VALIDATED

      Source sequence(s)
      AU164019, CI462594, CI678606
      UniProtKB/Swiss-Prot
      Q01883, Q01884, Q0D7S5, Q8H4M2
      UniProtKB/TrEMBL
      A2YJF9, A3BHT2

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      6332485..6333250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)