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    LOC4347171 uncharacterized LOC4347171 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347171, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347171
    Gene description
    uncharacterized LOC4347171
    Locus tag
    OSNPB_090440200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1344_B01.26
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    Genomic context

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    See LOC4347171 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (20706013..20709953)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (16325868..16329926)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4347168 Neighboring gene protein DEEPER ROOTING 1-like Neighboring gene aldehyde dehydrogenase family 7 member A1 Neighboring gene copper transporter 5.1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of rice (Oryza sativa) proteins linked to the cyclin-mediated regulation of the cell cycle. Cooper B, et al. Plant Mol Biol, 2003 Oct. PMID 14750518
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4347171
    Names
    Os09g0440200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      20706013..20709953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756348.3 → XP_015611834.1  uncharacterized protein LOC4347171

      UniProtKB/TrEMBL
      B9G3U7, Q0J1H1, Q69P85
      Conserved Domains (1) summary
      cd17731
      Location:52 → 131
      BRCT_TopBP1_rpt2_like; second BRCT domain of DNA topoisomerase 2-binding protein 1 (TopBP1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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