U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4341001 uncharacterized LOC4341001 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341001, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC4341001
    Gene description
    uncharacterized LOC4341001
    Locus tag
    OSNPB_060360600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    Os06g0360600
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC4341001 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (15081357..15098977, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (14895808..14913545, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL20z Neighboring gene uncharacterized protein At2g34460, chloroplastic Neighboring gene uncharacterized LOC107281459 Neighboring gene uncharacterized LOC136356831 Neighboring gene uncharacterized LOC107281272

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC4341001

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      15081357..15098977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066311296.1 → XP_066167393.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    2. XM_066311295.1 → XP_066167392.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    3. XM_066311302.1 → XP_066167399.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    4. XM_066311297.1 → XP_066167394.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    5. XM_066311307.1 → XP_066167404.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4

    6. XM_066311300.1 → XP_066167397.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    7. XM_066311299.1 → XP_066167396.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    8. XM_066311293.1 → XP_066167390.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    9. XM_026026043.2 → XP_025881828.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4
      Conserved Domains (1) summary
      pfam13851
      Location:33 → 127
      GAS; Growth-arrest specific micro-tubule binding

    10. XM_066311301.1 → XP_066167398.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    11. XM_066311308.1 → XP_066167405.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4

    12. XM_066311294.1 → XP_066167391.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    13. XM_066311292.1 → XP_066167389.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    14. XM_066311306.1 → XP_066167403.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4

    15. XM_066311303.1 → XP_066167400.1  uncharacterized protein LOC4341001 isoform X2

    16. XM_066311305.1 → XP_066167402.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4

    17. XM_066311298.1 → XP_066167395.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    18. XM_066311291.1 → XP_066167388.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    19. XM_066311289.1 → XP_066167386.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3

    20. XM_066311304.1 → XP_066167401.1  uncharacterized protein LOC4341001 isoform X3

      UniProtKB/TrEMBL
      Q0DCA4

    21. XM_066311290.1 → XP_066167387.1  uncharacterized protein LOC4341001 isoform X1

      UniProtKB/TrEMBL
      Q9SSW3
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.