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    LOC4350941 probable non-specific lipid-transfer protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350941, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4350941
    Gene description
    probable non-specific lipid-transfer protein 2
    Locus tag
    OSNPB_110620300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    ltp1
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    Genomic context

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    See LOC4350941 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (26132385..26132855)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (24180897..24181430)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ATP-independent inner membrane protease subunit 1a Neighboring gene oligouridylate-binding protein 1B Neighboring gene monosaccharide-sensing protein 2 Neighboring gene pollen receptor-like kinase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable non-specific lipid-transfer protein 2
    Names
    Os11g0620300
    lipid transfer protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      26132385..26132855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015761081.3 → XP_015616567.1  probable non-specific lipid-transfer protein 2

      UniProtKB/TrEMBL
      A0A8J8XKR7, B9G8L9, Q0IRK9, Q2R132, Q6ZX07
      Conserved Domains (1) summary
      cd01959
      Location:44 → 109
      nsLTP2; Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, ...
    Nucleotide Protein
    Heading Accession and Version

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